Open
Milestone
started on Jul 1, 2022
SonadorAI: MVP
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Determine use cases and requirements -
DataSet
: Get data from Orthanc to DL frameworks- High variability of how data should be structured based on the dataset.
- High variability on where label data is stored (private tags, DICOMseg files, annotations)
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DataSet
should provide a bridge from Sonador/Orthanc to PyTorch tensor. Look at TensorFlow/Keras in the near future.
- Data reproducibility: create tools to help manage ML lifecycle. Maybe this utilizes MLflow, https://mlflow.org/?
- Experiment and plan: explore and visualize
- Register project and track data science code required to reproduce runs on any platform
- Save binary artifacts to compare performance between different models
- Model registry: store annotate, discover, and manage models in a central repository
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Implement DataSet
for PyTorch and TensorFlow- Clinical use-case 1: Chest X-Ray classification
- Clinical use-case 2: ????
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